Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846918.1_cds_XP_016509824.1_22730
CDS Infomation

[gene=LOC107827240] [db_xref=GeneID:107827240] [protein=G-type lectin S-receptor-like serine/threonine-protein kinase RLK1] [protein_id=XP_016509824.1] [location=join(62698..63237,63881..65443)] [gbkey=CDS]
Sequence

ATGGTTTCTTCCCTTTTTTATCTTCTATTGTTTCTGTTTTTCTTTCCACAACACAATTTA
GCTCAAAATAATGGTAGAGTAGCTACTAGCACTTCTCTTACTGCAACAGATGAAACCACT
CCATGGTTTTCACCATCTGGTGATTTTGCATTTGGGTTCCAAAAACTTCAAGATAAAGAT
CAATTCTTGCTTTGTATATGGTATGCAAAAATACAGGAAAAGACCATAGTATGGCATGCA
AATATCAGTAATCCAGTGCCACGTGGATCAAGATTACAGCTTGATTCTCAAAATGGTCTC
ATACTTAGTGATACACAAGGCAATACAATTTGGAGAACTGATATGGTTTTTGGTAATATT
GACCATGGATTTATGAATGATACTGGAAATTTTGTTATTATGGGAAATGATTCTGCTGAT
CCATTGTGGGAAAGTTTTAGAAATCCAACTGACACTTTGTTGCCAAGTCAAACATTGGAA
AGAGGGAGCTTCCTTGTTTCTCAAAGATCAGAAGCTAATTTCTCTCAAGGTATTGCTTCG
GAATCGAGGCGTATTTGTTGTTGTATGTCTCAACACGCCCCCCCCCCNGCAGGGGCGTGT
GGATACAATAATGTGTGCAATCTTGGTACAAACAAAAGACCAGTTTGTAACTGTCCTGAA
GGATATTCACTAGTTGATCCAAATGATACTTATGGCAACTGCAAACCAGATTCTGCTGTA
AGTTGTGATGATGTTGCAAGGGGGTCACCCGAAGATTTGTACAGTTTTATCACGGTTCGT
GATACTGATTGGCCAATGTCTGACCTTCAGAAGATTAGCCCTTCTACTGAACAAGACTGC
CAAAGTTTCTGTTTGAATGATTGTTTTTGTGCTGTTGCCATTTATAGAAGCGATAGCTGC
TGGAAAAAGAAGCTGCCACTGTGGAATGGGAGAATAGACACCAGTCTGAATGCGAAAGCT
TTTATCAAGAGAAGGAAAAATGGTGTTCCTCCTCTAAGTCCTGGGCTTCCAAATCCAGGA
TCTCCTCAAAGCAAGAATTGGCGAAATTGGGCAGTTGTGTCGTCCACGCTCTTAGGTAGC
TCTGTGTTGGTGAATGTTCTCTTTGTTGGTGTACTTTGTTGGGGATTCTTCCACATTTAT
AAAAAGAAAGCGAAAACATTTCGCCCCACAAGTCATGTAGCAGACTCTATTTGTCATAGT
TTTACATATAAAGAACTTGTCGAAGCCACAACAGACTTCAAGGAAGAGCTAGGCAGGGGC
GCCTTTGGGATTGTTTACAAAGGAGTGATGCCTATCGGTTCAAGAAATGTTGTTGCTGTA
AAGAAGCTGGATAGAGTTGCTCACGAAACAGAGAAGGAATTCATGACTGAAGTAAATGTG
ATTAGTCAGACTCATCACAAAAATTTGGTCCGTCTTCTTGGATATTGTAACGAGGGACCT
CATCGCTTGTTGGTCTATGAGTATATGAGTAACGGCACTCTTGCAAGTTATCTTTTTGGT
GATCAAAAACCTACTTGGAGCCAGAGGACGAAAGTTGCAATGGGGATTGCAAGGGGACTC
GCTTACCTCCACGAAGAGTGCAGTACACAGATTATTCATTGTGACATAAAGCCTCAAAAC
ATTCTTCTAGATGATTACTATATTGCCCGAATATCAGATTTTGGATTGTCTAAACTTCTG
ATGATTAACCAGAGCCGAACTCTTACCGATATAAGAGGAACAAGAGGTTATGTTGCTCCA
GAATGGTTCAGGAATAGTCAGGTCACGGTTAAGGTGGATGTTTACAGCTTTGGAGTGTTG
CTACTAGAGATCATCACTTGTCGGAAAAGCTTGGAGAATGAGGAAAGCTATGGACCGGAG
GCAATTCTTACAGATTGGGTTTTGGATTGCTTTCATGACGGAAAATTGGAAGCTTTGGTA
GAGACTGATACTGAGGCCTTGAATGACAAGAAGCAGCTCGAGAGGTTCGTGATGGTTGGT
ATTTGGTGCATCCAAGAAGATTCAACAATGAGGCCGACTATGAGGAAAGTCACTCAAATG
CTTGAAGGATCTGTCGAAGTAACTACTCCACCTTGCCCTTATACATTCAGCACTACTATT
TAA

Peptide Sequence

PEP ID

XP_016509824.1
PEP Infomation

PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Nicotiana tabacum]
Sequence

MVSSLFYLLLFLFFFPQHNLAQNNGRVATSTSLTATDETTPWFSPSGDFAFGFQKLQDKD
QFLLCIWYAKIQEKTIVWHANISNPVPRGSRLQLDSQNGLILSDTQGNTIWRTDMVFGNI
DHGFMNDTGNFVIMGNDSADPLWESFRNPTDTLLPSQTLERGSFLVSQRSEANFSQGIAS
ESRRICCCMSQHAPPPAGACGYNNVCNLGTNKRPVCNCPEGYSLVDPNDTYGNCKPDSAV
SCDDVARGSPEDLYSFITVRDTDWPMSDLQKISPSTEQDCQSFCLNDCFCAVAIYRSDSC
WKKKLPLWNGRIDTSLNAKAFIKRRKNGVPPLSPGLPNPGSPQSKNWRNWAVVSSTLLGS
SVLVNVLFVGVLCWGFFHIYKKKAKTFRPTSHVADSICHSFTYKELVEATTDFKEELGRG
AFGIVYKGVMPIGSRNVVAVKKLDRVAHETEKEFMTEVNVISQTHHKNLVRLLGYCNEGP
HRLLVYEYMSNGTLASYLFGDQKPTWSQRTKVAMGIARGLAYLHEECSTQIIHCDIKPQN
ILLDDYYIARISDFGLSKLLMINQSRTLTDIRGTRGYVAPEWFRNSQVTVKVDVYSFGVL
LLEIITCRKSLENEESYGPEAILTDWVLDCFHDGKLEALVETDTEALNDKKQLERFVMVG
IWCIQEDSTMRPTMRKVTQMLEGSVEVTTPPCPYTFSTTI

Transcript Sequence

Gene sequence data has not been registered.